PlanTEnrichment

Welcome to PlanTEnrichment

PlanTEnrichment is a unique tool that permits enrichment analysis of transposable elements associated with a given gene list. It takes, for example, a group of differentially expressed plant genes under a particular biological condition as input and returns the list of transposable elements associated with those genes, along with their calculated enrichment scores and statistical significances. Read more...

Analyze your gene list

Select a species Arabidopsis thaliana Brachypodium distachyon Glycine max Hordeum vulgare Medicago truncatula Oryza sativa Populus trichocarpa Solanum lycopersicum Sorghum bicolor Triticum aestivum Zea mays

Search within 1000 bp 2500 bp 5000 bp

Select a gene identifier Ensembl gene ID Ensembl transcript ID Entrez gene ID Uniprot ID Multiple regions (Chr:Start:End:Strand)

Your gene list Paste a sample list: #1 #2 #3 #4

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How to cite? Gökhan Karakülah, Aslı Suner. PlanTEnrichment: A tool for enrichment analysis of transposable elements in plants, Genomics (2017), doi:10.1016/j.ygeno.2017.05.008